file1 taxa_metagenome.txt file2 metabolites.txt file1_type Metagenome: Taxon-stratified KO abundances (HUMAnN2 or PICRUSt/PICRUSt2) ref_choices PICRUSt KO genomes and KEGG metabolic model netAdd network_KO_additions.txt logTransform T metType KEGG Compound IDs data_prefix ~/Documents/MIMOSA2shiny/data/ vsearch_path ~/Documents/MIMOSA2shiny/bin/vsearch rankBased F signifThreshold 1